C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000048273 pan3-001 ENSDARG00000031637 7955 + 24:22328269-22356648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000048273
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000048273 6.643±1.96 1.498±1.17 5.557±0.00 0.916±0.00 3.233±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G0 CIL_0000G0_0001 CGP 24:22299887-22356648
CIL_0000G1 CIL_0000G1_0001 CGP 24:22328252-22416767

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380958 PAN3-002 protein_coding Homo_sapiens 0 889
ENST00000399613 PAN3-001 protein_coding Homo_sapiens 0 889
ENST00000503791 PAN3-004 retained_intron Homo_sapiens 0 492

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