C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000075402 rpl31-201 ENSDARG00000053365 7955 - 9:57952846-57957993 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000075402
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000075402 763.182±0.00 2293.580±0.00 6.021±0.00 1656.380±0.00 1622.590±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060994 Rpl31-ps13-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000085128 Rpl31-ps1-201 processed_pseudogene Mus_musculus 0 233
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 272
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000097040 Rpl31-ps17-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000116034 Rpl31-ps10-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000119957 Rpl31-ps12-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000120312 Gm12304-001 processed_pseudogene Mus_musculus 0.0000005 58
ENSMUST00000143596 Rpl31-ps14-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 272
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 272
ENSMUST00000181130 Rpl31-ps16-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000181350 Rpl31-ps24-001 processed_pseudogene Mus_musculus 1e-37 159
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000191562 RP24-82I5.2-001 processed_pseudogene Mus_musculus 3e-28 128

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