C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myocyte enhancer factor 2ca
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000099134 mef2ca-203 ENSDARG00000029764 7955 - 10:45067604-45175629 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSDART00000099134
Transcript ID Heart
ENSDART00000099134 2.637±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000976 IDA transcription regulatory region sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007507 IGI heart development
GO:0030241 IGI skeletal muscle myosin thick filament assembly
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity
GO:0055007 IGI cardiac muscle cell differentiation
GO:0055013 IGI cardiac muscle cell development
GO:0060349 IMP bone morphogenesis
GO:0060536 IMP cartilage morphogenesis
GO:0060914 IGI heart formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001455 Mef2d-001 protein_coding Mus_musculus 0 281
ENSMUST00000005722 Mef2c-201 protein_coding Mus_musculus 0 289
ENSMUST00000107558 Mef2d-003 protein_coding Mus_musculus 0 244
ENSMUST00000107559 Mef2d-004 protein_coding Mus_musculus 0 281
ENSMUST00000119251 Mef2d-002 protein_coding Mus_musculus 0 281
ENSMUST00000163888 Mef2c-202 protein_coding Mus_musculus 0 577
ENSMUST00000185052 Mef2c-001 protein_coding Mus_musculus 0 516
ENST00000340208 MEF2C-005 protein_coding Homo_sapiens 0.00000001 68
ENST00000424173 MEF2C-004 protein_coding Homo_sapiens 0.00000001 68
ENST00000502831 MEF2C-007 protein_coding Homo_sapiens 0.000000002 68
ENST00000503955 MEF2C-008 retained_intron Homo_sapiens 0.0000000007 68

Loading