C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ventricular myosin heavy chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000099532 vmhc-001 ENSDARG00000079564 7955 + 2:23594235-23607626 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099532
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099532 0.048±0.03 20.456±13.19 1.138±1.05 0.027±0.00 1.041±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Z7 CIL_0004Z7_0004 CGP 2:23574503-23607626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0016459 IEA myosin complex
GO:0035050 IEP embryonic heart tube development
GO:0055005 IMP ventricular cardiac myofibril assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007301 Myh3-201 protein_coding Mus_musculus 0 1478
ENSMUST00000018632 Myh4-001 protein_coding Mus_musculus 0 2359
ENSMUST00000018637 Myh1-003 protein_coding Mus_musculus 0 2398
ENSMUST00000018641 Myh2-001 protein_coding Mus_musculus 0 2414
ENSMUST00000019625 Myh8-001 protein_coding Mus_musculus 0 2331
ENSMUST00000075734 Myh1-201 protein_coding Mus_musculus 0 2398
ENSMUST00000081911 Myh13-201 protein_coding Mus_musculus 0 2185
ENSMUST00000108684 Myh13-001 protein_coding Mus_musculus 0 2185
ENSMUST00000108685 Myh8-003 protein_coding Mus_musculus 0 254
ENSMUST00000108686 Myh8-002 retained_intron Mus_musculus 0 1120
ENSMUST00000108689 Myh3-001 protein_coding Mus_musculus 0 1478
ENSMUST00000124516 Myh1-001 protein_coding Mus_musculus 0 2398
ENSMUST00000139052 Myh8-004 retained_intron Mus_musculus 0 455
ENSMUST00000165221 Myh3-202 protein_coding Mus_musculus 0 1478
ENSMUST00000170159 Myh2-201 protein_coding Mus_musculus 0 2414
ENSMUST00000170942 Myh4-201 protein_coding Mus_musculus 0 2359
ENSMUST00000180845 Myh13-002 protein_coding Mus_musculus 0 2185
ENSMUST00000181027 Myh13-004 protein_coding Mus_musculus 0 298
ENST00000226207 MYH1-001 protein_coding Homo_sapiens 0 2639
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 2340
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 1158
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 2494
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 2929
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 2340
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 2388
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 2929
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 1158
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 274
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 808
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 918
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 329
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 0 250
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 1546
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 1158
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 808

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