C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RNA binding motif protein 46
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000110698 rbm46-001 ENSDARG00000079452 7955 + 1:9303266-9313555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000110698
Transcript ID Brain Heart Kidney
ENSDART00000110698 0.078±0.03 0.027±0.00 2.536±1.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OJ CIL_0000OJ_0001 CGP 1:9294558-9313555
CIL_0000O0 CIL_0000O0_0001 CGP 1:9303266-9411440

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094756 Rbm47-005 protein_coding Mus_musculus 0 231
ENSMUST00000094757 Rbm47-004 protein_coding Mus_musculus 0 231
ENSMUST00000113724 Rbm47-002 protein_coding Mus_musculus 0 231
ENSMUST00000113725 Rbm47-006 protein_coding Mus_musculus 0 231
ENSMUST00000113726 Rbm47-001 protein_coding Mus_musculus 0 231
ENSMUST00000132606 Rbm47-007 retained_intron Mus_musculus 0 231
ENSMUST00000145625 Rbm47-011 protein_coding Mus_musculus 1.4013e-45 187
ENSMUST00000167950 Rbm47-201 protein_coding Mus_musculus 0 231

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