C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromatin assembly factor 1, subunit A (p150)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000111711 chaf1a-202 ENSDARG00000062152 7955 - 22:22640136-22665058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSDART00000111711
Transcript ID Kidney
ENSDART00000111711 16.792±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006281 IEA DNA repair
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0031497 ISS chromatin assembly
GO:0033186 ISS CAF-1 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017622 Zc3h18-001 protein_coding Mus_musculus 0.0002 53
ENSMUST00000093073 Zc3h18-002 protein_coding Mus_musculus 0.0002 53
ENSMUST00000119613 Gm5939-001 processed_pseudogene Mus_musculus 0.0002 53
ENSMUST00000176629 Zc3h18-005 protein_coding Mus_musculus 0.0002 53
ENSMUST00000177386 Zc3h18-003 retained_intron Mus_musculus 0.0002 53

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