C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sine oculis-related homeobox 6a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000111763 six6a-002 ENSDARG00000025187 7955 + 13:31806636-31829584 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENSDART00000111763
Transcript ID Brain Muscle
ENSDART00000111763 0.312±0.08 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036B CIL_00036B_0001 CGP 13:31806636-31845797

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021519 Six6-001 protein_coding Mus_musculus 0 457
ENSMUST00000132067 4930447C04Rik-003 protein_coding Mus_musculus 0.000004 57

Loading