C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PNN-interacting serine/arginine-rich protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123980 pnisr-002 ENSDARG00000069855 7955 - 16:34978828-34986252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000123980
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000123980 58.610±18.19 11.477±8.25 10.844±6.68 1.537±0.00 2.463±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Y7 CIL_0001Y7_0001 CGP 16:34966820-34987353
CIL_0001YC CIL_0001YC_0001 CGP 16:34978820-35041669

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029911 Pnisr-001 protein_coding Mus_musculus 1e-23 117
ENSMUST00000098238 Pnisr-005 protein_coding Mus_musculus 4e-28 132
ENST00000369239 PNISR-007 protein_coding Homo_sapiens 3.9937e-43 182
ENST00000438806 PNISR-201 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000460600 PNISR-004 processed_transcript Homo_sapiens 0.000000000008 77
ENST00000478777 PNISR-008 nonsense_mediated_decay Homo_sapiens 3e-22 111

Loading