C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spleen focus forming virus (SFFV) proviral integration oncogene spi1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000126831 spi1b-203 ENSDARG00000000767 7955 - 7:33979938-33993558 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000126831
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000126831 1.551±0.03 5.530±0.00 31.659±9.14 0.128±0.00 5.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LM CIL_0002LM_0001 CGP 7:33979183-34050526

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002180 Spi1-001 protein_coding Mus_musculus 0 257
ENST00000227163 SPI1-004 protein_coding Homo_sapiens 0 246
ENST00000378538 SPI1-001 protein_coding Homo_sapiens 0 246
ENST00000533030 SPI1-003 protein_coding Homo_sapiens 0 244

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