C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: LIM homeobox transcription factor 1, beta b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127460 lmx1bb-201 ENSDARG00000068365 7955 - 8:34108286-34229426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000127460
Transcript ID Brain Heart Kidney
ENSDART00000127460 1.198±0.43 0.138±0.00 2.129±1.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XW CIL_0002XW_0001 CGP 8:34108286-34417006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002072 IGI optic cup morphogenesis involved in camera-type eye development
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0021592 IGI fourth ventricle development
GO:0030917 IGI midbrain-hindbrain boundary development
GO:0032474 IMP otolith morphogenesis
GO:0042472 IMP inner ear morphogenesis
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding
GO:0048752 IMP semicircular canal morphogenesis
GO:0060041 IGI retina development in camera-type eye
GO:0060117 IMP auditory receptor cell development
GO:0061386 IGI closure of optic fissure

Homologs

No Homologs available.

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