C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000130326 rbb4-201 ENSDARG00000029058 7955 - 19:32243949-32252563 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000130326
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000130326 7.557±2.12 5.143±0.11 16.806±0.00 0.642±0.00 1.119±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A8 CIL_0002A8_0001 CGP 19:32236213-32252815

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033720 Rbbp7-001 protein_coding Mus_musculus 0 804
ENSMUST00000112326 Rbbp7-002 protein_coding Mus_musculus 0 673
ENSMUST00000112327 Rbbp7-003 protein_coding Mus_musculus 0 616
ENSMUST00000143681 Rbbp7-004 protein_coding Mus_musculus 0 224
ENST00000330735 RBBP7-003 retained_intron Homo_sapiens 0 224
ENST00000380084 RBBP7-008 protein_coding Homo_sapiens 0 758
ENST00000380087 RBBP7-006 protein_coding Homo_sapiens 0 760
ENST00000404022 RBBP7-010 protein_coding Homo_sapiens 0 562
ENST00000425696 RBBP7-007 protein_coding Homo_sapiens 0 193
ENST00000444437 RBBP7-002 protein_coding Homo_sapiens 0 339
ENST00000465244 RBBP7-011 retained_intron Homo_sapiens 7e-25 121
ENST00000481586 RBBP7-009 retained_intron Homo_sapiens 0 270

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