C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PNN-interacting serine/arginine-rich protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000133071 pnisr-006 ENSDARG00000069855 7955 - 16:34980053-34982966 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000133071
Transcript ID Brain Heart Liver Muscle
ENSDART00000133071 42.893±0.00 16.956±0.00 1.932±0.00 6.553±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Y7 CIL_0001Y7_0001 CGP 16:34966820-34987353
CIL_0001YC CIL_0001YC_0001 CGP 16:34978820-35041669

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000108229 Pnisr-002 protein_coding Mus_musculus 3e-32 145
ENSMUST00000185001 Pnisr-004 nonsense_mediated_decay Mus_musculus 7e-28 130
ENST00000369239 PNISR-007 protein_coding Homo_sapiens 0.000000000006 79
ENST00000438806 PNISR-201 protein_coding Homo_sapiens 0.000000000003 79
ENST00000460600 PNISR-004 processed_transcript Homo_sapiens 1e-34 152
ENST00000478777 PNISR-008 nonsense_mediated_decay Homo_sapiens 2e-29 135

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