C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, AMPA 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000134602 gria2b-003 ENSDARG00000052765 7955 + 14:37026699-37030817 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DX CIL_0006DX_0001 CGP 14:36912246-37033972
CIL_00007X CIL_00007X_0001 CGP 14:36968744-37103245

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000063508 Gria4-202 protein_coding Mus_musculus 0 274
ENSMUST00000075316 Gria2-201 protein_coding Mus_musculus 0 322
ENSMUST00000076349 Gria3-001 protein_coding Mus_musculus 0 294
ENSMUST00000107745 Gria2-202 protein_coding Mus_musculus 0 473
ENSMUST00000139965 Gria3-002 nonsense_mediated_decay Mus_musculus 0 294
ENST00000264426 GRIA2-002 protein_coding Homo_sapiens 0 333
ENST00000282499 GRIA4-201 protein_coding Homo_sapiens 0 279
ENST00000296526 GRIA2-001 protein_coding Homo_sapiens 0 490
ENST00000323661 GRIA2-006 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000393815 GRIA2-004 protein_coding Homo_sapiens 0 490
ENST00000471736 GRIA2-003 retained_intron Homo_sapiens 0 490
ENST00000507898 GRIA2-005 protein_coding Homo_sapiens 0 490
ENST00000510854 GRIA2-012 protein_coding Homo_sapiens 0 505
ENST00000525942 GRIA4-007 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000530497 GRIA4-005 protein_coding Homo_sapiens 0 279
ENST00000620443 GRIA3-001 protein_coding Homo_sapiens 0 300
ENST00000620581 GRIA3-201 protein_coding Homo_sapiens 0 300

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