C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytoplasmic linker associated protein 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000137955 clasp1a-001 ENSDARG00000010280 7955 + 9:39216185-39344118 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000137955
Transcript ID Brain Liver Muscle
ENSDART00000137955 3.792±0.00 0.566±0.00 1.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VI CIL_0001VI_0001 CGP 9:39210879-39344120
CIL_0001QO CIL_0001QO_0001 CGP 9:39216185-39364059

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111838 Clasp2-201 protein_coding Mus_musculus 0 442
ENSMUST00000163895 Clasp2-202 protein_coding Mus_musculus 0 442
ENST00000263710 CLASP1-201 protein_coding Homo_sapiens 0 508
ENST00000397587 CLASP1-202 protein_coding Homo_sapiens 0 508
ENST00000409078 CLASP1-001 protein_coding Homo_sapiens 0 508
ENST00000452274 CLASP1-016 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000455322 CLASP1-203 protein_coding Homo_sapiens 0 508
ENST00000541377 CLASP1-204 protein_coding Homo_sapiens 0 508

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