C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neurexin 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000141629 nrxn2a-001 ENSDARG00000061454 7955 - 21:27030682-27735371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSDART00000141629
Transcript ID Brain
ENSDART00000141629 5.263±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005J6 CIL_0005J6_0001 CGP 21:27030682-27833993

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007268 IEA synaptic transmission
GO:0007269 IEA neurotransmitter secretion
GO:0007416 IEA synapse assembly
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0046872 IEA metal ion binding
GO:0051965 IEA positive regulation of synapse assembly
GO:0090129 IEA positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057634 Nrxn3-002 protein_coding Mus_musculus 0 318
ENSMUST00000163134 Nrxn3-001 protein_coding Mus_musculus 0 394
ENSMUST00000167103 Nrxn3-003 nonsense_mediated_decay Mus_musculus 0 279
ENSMUST00000167887 Nrxn3-201 protein_coding Mus_musculus 0 267
ENSMUST00000190626 Nrxn3-012 nonsense_mediated_decay Mus_musculus 0 303
ENST00000335750 NRXN3-201 protein_coding Homo_sapiens 0 305
ENST00000554719 NRXN3-001 protein_coding Homo_sapiens 0 368
ENST00000554738 NRXN3-002 nonsense_mediated_decay Homo_sapiens 0 237
ENST00000556496 NRXN3-003 retained_intron Homo_sapiens 8e-38 163

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