C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: smoothelin b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000144570 smtnb-001 ENSDARG00000059442 7955 - 5:72150092-72176308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000144570
Transcript ID Brain Heart Kidney Muscle
ENSDART00000144570 0.806±0.00 6.139±0.58 0.263±0.02 0.427±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000NL CIL_0000NL_0001 CGP 5:72138191-72176308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020718 Smtn-002 protein_coding Mus_musculus 7e-17 94
ENSMUST00000020721 Smtn-001 protein_coding Mus_musculus 1e-16 94
ENSMUST00000075118 Smtn-003 protein_coding Mus_musculus 1e-16 94
ENSMUST00000110011 Smtn-009 protein_coding Mus_musculus 0 272
ENSMUST00000154861 Smtn-004 processed_transcript Mus_musculus 1e-16 94
ENSMUST00000170588 Smtn-201 protein_coding Mus_musculus 1e-16 94

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