C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly-U binding splicing factor a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000144613 puf60a-001 ENSDARG00000032175 7955 - 2:32371845-32389729 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartMuscleENSDART00000144613
Transcript ID Brain Heart Muscle
ENSDART00000144613 5.653±1.66 3.636±0.64 1.832±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006FY CIL_0006FY_0001 CGP 2:32371845-32456410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313352 PUF60-004 protein_coding Homo_sapiens 0 281
ENST00000349157 PUF60-002 protein_coding Homo_sapiens 0 281
ENST00000453551 PUF60-003 protein_coding Homo_sapiens 0 281
ENST00000456095 PUF60-005 protein_coding Homo_sapiens 0 281
ENST00000526683 PUF60-001 protein_coding Homo_sapiens 0 281
ENST00000527197 PUF60-006 protein_coding Homo_sapiens 0 281
ENST00000612237 PUF60-201 protein_coding Homo_sapiens 0 281
ENST00000620341 PUF60-202 protein_coding Homo_sapiens 0 281
ENST00000620953 PUF60-203 protein_coding Homo_sapiens 0 281

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