C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rad and gem related GTP binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000369 Rem1-001 ENSMUSG00000000359 10090 + 2:152626951-152635194 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000369
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000369 6.946±1.31 5.984±1.47 4.945±0.20 0.195±0.13 4.897±1.11 5.122±0.39 1.953±0.41 4.349±0.77 0.355±0.24 5.251±0.97 0.900±0.24 7.581±2.81 0.586±0.43 0.580±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096R CIL_00096R_0002 VISTA 2:152099091-152699726
CIL_0008K5 CIL_0008K5_0002 VISTA 2:152434876-153035572
CIL_00089Z CIL_00089Z_0002 VISTA 2:152488201-153091382
CIL_0008N4 CIL_0008N4_0002 VISTA 2:152517372-153118197
CIL_0001A7 CIL_0001A7_0002 CGP 2:152622356-152635198
CIL_0001A0 CIL_0001A0_0002 CGP 2:152626951-152708670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IEA calmodulin binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000201979 REM1-001 protein_coding Homo_sapiens 0 920

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