C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E2F transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000894 E2f1-002 ENSMUSG00000027490 10090 - 2:154559634-154569720 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000000894
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000000894 3.346±2.07 2.470±0.49 1.657±0.02 2.847±0.96 1.499±0.35 0.264±0.04 0.606±0.30 2.856±1.97 3.475±0.79 2.415±1.02 4.005±2.05 0.727±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00003O CIL_00003O_0002 CGP 2:154551776-154569892
CIL_0001NZ CIL_0001NZ_0002 CGP 2:154559407-154603708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 ISO DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0030900 IMP forebrain development
GO:0043276 IDA anoikis
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051726 IDA regulation of cell cycle
GO:0072332 IDA intrinsic apoptotic signaling pathway by p53 class mediator
GO:1990086 IDA lens fiber cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000018119 e2f4-001 protein_coding Danio_rerio 0.000000002 69
ENST00000343380 E2F1-001 protein_coding Homo_sapiens 0 1123
ENST00000622594 E2F1-201 protein_coding Homo_sapiens 0 1118

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