C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lectin, mannose-binding 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001171 Lman2l-003 ENSMUSG00000001143 10090 - 1:36423186-36445271 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000001171
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000001171 4.891±1.53 6.111±1.48 1.838±0.00 7.317±3.95 2.246±0.46 5.611±1.26 1.977±0.67 3.704±0.34 5.295±1.37 2.531±0.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OA CIL_0003OA_0002 CGP 1:36422065-36508764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264963 LMAN2L-001 protein_coding Homo_sapiens 0 704
ENST00000377079 LMAN2L-007 protein_coding Homo_sapiens 0 708
ENST00000434524 LMAN2L-006 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000434865 LMAN2L-005 nonsense_mediated_decay Homo_sapiens 0 704
ENST00000440610 LMAN2L-003 nonsense_mediated_decay Homo_sapiens 0 848
ENST00000446780 LMAN2L-004 nonsense_mediated_decay Homo_sapiens 0 708
ENST00000449221 LMAN2L-002 nonsense_mediated_decay Homo_sapiens 0 708
ENST00000474494 LMAN2L-009 retained_intron Homo_sapiens 0 348
ENST00000480869 LMAN2L-008 retained_intron Homo_sapiens 0 326

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