C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycosylated lysosomal membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001454 0610031J06Rik-009 ENSMUSG00000001418 10090 + 3:88325082-88328368 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainMuscleOvaryPlacentaENSMUST00000001454
Transcript ID Adrenal Brain Muscle Ovary Placenta
ENSMUST00000001454 24.585±7.22 2.291±0.00 3.723±0.60 19.145±8.70 37.907±15.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008JO CIL_0008JO_0002 VISTA 3:87838105-88441065
CIL_0008P5 CIL_0008P5_0002 VISTA 3:88218217-88823366
CIL_000898 CIL_000898_0002 VISTA 3:88224783-88827970

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000362007 C1orf85-001 protein_coding Homo_sapiens 0 276
ENST00000472870 C1orf85-007 nonsense_mediated_decay Homo_sapiens 0 278
ENST00000479084 C1orf85-003 retained_intron Homo_sapiens 0 226
ENST00000612353 C1orf85-201 protein_coding Homo_sapiens 0 276
ENST00000614643 C1orf85-202 protein_coding Homo_sapiens 0 222

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