C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001484 Tbx21-001 ENSMUSG00000001444 10090 - 11:97098071-97115331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001484 0.306±0.06 0.250±0.06 0.642±0.05 0.024±0.01 1.202±0.57 0.166±0.06 0.127±0.08 0.139±0.06 0.085±0.05 1.016±0.28 0.336±0.11 0.227±0.08 0.042±0.02 0.093±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0009615 IEA response to virus
GO:0030217 IMP T cell differentiation
GO:0043025 IDA neuronal cell body
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0048304 IMP positive regulation of isotype switching to IgG isotypes
GO:0050776 IMP regulation of immune response
GO:0071310 IDA cellular response to organic substance
GO:0072676 IMP lymphocyte migration

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000177694 TBX21-001 protein_coding Homo_sapiens 0 1746
ENST00000581328 TBX21-002 retained_intron Homo_sapiens 0 750

Loading