C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family D (ALD), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002084 Abcd1-001 ENSMUSG00000031378 10090 + X:73716597-73738534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002084
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002084 13.959±0.30 17.144±0.60 10.236±0.66 3.540±2.21 19.756±3.84 16.430±0.73 10.587±1.66 7.404±0.74 7.948±3.23 21.890±1.48 6.654±0.91 12.051±3.19 12.279±5.10 8.109±3.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001UW CIL_0001UW_0002 CGP X:73686178-73738534
CIL_0007GI CIL_0007GI_0003 CGP X:73716597-73772514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005325 IEA peroxisomal fatty-acyl-CoA transporter activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005777 IEA peroxisome
GO:0005778 IDA peroxisomal membrane
GO:0005779 IEA integral component of peroxisomal membrane
GO:0006200 IEA ATP catabolic process
GO:0006635 IMP fatty acid beta-oxidation
GO:0015910 IEA peroxisomal long-chain fatty acid import
GO:0016020 IEA membrane
GO:0019899 IEA enzyme binding
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0042758 IEA long-chain fatty acid catabolic process
GO:0042760 IEA very long-chain fatty acid catabolic process
GO:0042802 IEA identical protein binding
GO:0042803 IEA protein homodimerization activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000218104 ABCD1-001 protein_coding Homo_sapiens 0 2715
ENST00000429313 ABCD1P2-001 unprocessed_pseudogene Homo_sapiens 0 597
ENST00000443684 ABCD1-002 protein_coding Homo_sapiens 0 686
ENST00000445663 ABCD1P5-001 unprocessed_pseudogene Homo_sapiens 0 377

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