C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: A kinase (PRKA) anchor protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002699 Akap8-201 ENSMUSG00000024045 10090 - 17:32303676-32321153 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000002699
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002699 6.441±0.00 19.213±0.92 25.468±12.44 20.569±3.66 8.670±5.80 3.697±1.85 11.353±7.86 19.027±4.08 4.562±1.81 22.773±7.76 15.226±3.82 13.888±2.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043N CIL_00043N_0002 CGP 17:32196274-32321153
CIL_000443 CIL_000443_0002 CGP 17:32303676-32350581

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000793 IDA condensed chromosome
GO:0001939 IDA female pronucleus
GO:0003690 IEA double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005739 IEA mitochondrion
GO:0005794 IEA Golgi apparatus
GO:0007076 IDA mitotic chromosome condensation
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016363 IDA nuclear matrix
GO:0034237 IEA protein kinase A regulatory subunit binding
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000269701 AKAP8-004 protein_coding Homo_sapiens 0 1768
ENST00000537303 AKAP8-003 retained_intron Homo_sapiens 0 931
ENST00000595416 AKAP8-006 retained_intron Homo_sapiens 0 381
ENST00000598597 AKAP8-001 nonsense_mediated_decay Homo_sapiens 0 789
ENST00000599883 AKAP8-005 nonsense_mediated_decay Homo_sapiens 5e-35 152

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