C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alcohol dehydrogenase 1 (class I)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004232 Adh1-001 ENSMUSG00000074207 10090 + 3:138277494-138290698 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004232
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004232 95.417±22.81 928.731±289.08 345.874±43.82 0.352±0.11 26.594±1.99 206.932±55.12 7.325±1.55 72.843±6.69 699.335±539.56 35.449±5.68 9.966±2.90 92.010±23.52 13.289±17.92 3.880±2.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C1 CIL_0005C1_0009 CGP 3:138217823-138290698
CIL_0005C1 CIL_0005C1_000B CGP 3:138260991-138331134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 IMP retinoid metabolic process
GO:0004022 TAS alcohol dehydrogenase (NAD) activity
GO:0005622 IDA intracellular
GO:0005739 IDA mitochondrion
GO:0006068 IMP ethanol catabolic process
GO:0008270 IEA zinc ion binding
GO:0032526 IDA response to retinoic acid
GO:0033574 IDA response to testosterone
GO:0042572 IMP retinol metabolic process
GO:0042573 IMP retinoic acid metabolic process
GO:0042803 IPI protein homodimerization activity
GO:0048149 IMP behavioral response to ethanol
GO:0048545 IDA response to steroid hormone
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237653 ADH6-003 protein_coding Homo_sapiens 0 230
ENST00000394897 ADH6-002 protein_coding Homo_sapiens 0 230
ENST00000394899 ADH6-001 protein_coding Homo_sapiens 0 230
ENST00000504257 ADH6-006 processed_transcript Homo_sapiens 0 228
ENST00000507484 ADH6-004 nonsense_mediated_decay Homo_sapiens 4.99997e-41 172
ENST00000508558 ADH6-008 protein_coding Homo_sapiens 0 204
ENST00000510055 ADH1C-004 protein_coding Homo_sapiens 0 573
ENST00000515683 ADH1C-001 protein_coding Homo_sapiens 0 1002

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