C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 110
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004614 Zfp110-001 ENSMUSG00000058638 10090 + 7:12834761-12850577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004614
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004614 5.760±0.93 1.948±0.77 8.727±0.90 2.978±1.48 4.742±0.40 2.786±1.06 2.349±0.21 3.782±0.48 3.528±0.62 5.394±0.71 2.500±0.16 4.092±1.71 4.755±1.05 17.550±4.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000551 CIL_000551_0002 CGP 7:12804977-12850577

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005166 IPI neurotrophin p75 receptor binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0043565 ISS sequence-specific DNA binding
GO:0046328 IMP regulation of JNK cascade
GO:0046872 IEA metal ion binding
GO:0051402 IMP neuron apoptotic process
GO:0097191 IMP extrinsic apoptotic signaling pathway
GO:1990009 IMP retinal cell apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326804 ZNF274-015 protein_coding Homo_sapiens 0 449
ENST00000345813 ZNF274-010 protein_coding Homo_sapiens 0 449
ENST00000424679 ZNF274-001 protein_coding Homo_sapiens 0 449
ENST00000595146 ZNF274-007 retained_intron Homo_sapiens 0 449
ENST00000610905 ZNF274-009 protein_coding Homo_sapiens 0 449
ENST00000617501 ZNF274-014 protein_coding Homo_sapiens 0 449

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