C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclic nucleotide gated channel alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000006020 Cnga2-001 ENSMUSG00000005864 10090 + X:71991849-72010218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000006020
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000006020 0.028±0.02 0.061±0.00 0.068±0.04 0.066±0.02 0.020±0.00 0.021±0.01 0.583±0.25 0.033±0.02 0.063±0.02 0.028±0.02 0.047±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DG CIL_0009DG_0002 VISTA X:71400355-72001555
CIL_0001AW CIL_0001AW_0002 CGP X:71972986-72010218
CIL_000117 CIL_000117_0002 CGP X:71991849-72222964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IMP ion channel activity
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005516 IEA calmodulin binding
GO:0005887 IBA integral component of plasma membrane
GO:0007603 IBA phototransduction, visible light
GO:0007608 IMP sensory perception of smell
GO:0030552 IEA cAMP binding
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329903 CNGA2-001 protein_coding Homo_sapiens 0 2392

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