C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IK cytokine
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000007042 Ik-201 ENSMUSG00000024474 10090 + 18:36744656-36757639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007042
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007042 13.485±0.94 8.299±2.85 41.689±3.90 84.540±71.30 15.169±5.60 8.298±3.01 14.128±1.28 14.619±2.21 21.386±10.57 14.319±3.99 20.370±0.94 38.153±66.33 102.472±90.23 136.479±192.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000154 CIL_000154_0002 CGP 18:36742332-36757639
CIL_0006ZH CIL_0006ZH_0002 CGP 18:36744656-36763708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0042802 IEA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000417647 IK-001 protein_coding Homo_sapiens 0 2263
ENST00000434096 AC007238.1-001 processed_pseudogene Homo_sapiens 0 1938
ENST00000502899 IK-006 protein_coding Homo_sapiens 0 911
ENST00000503332 IK-008 nonsense_mediated_decay Homo_sapiens 0 416
ENST00000507593 IK-009 protein_coding Homo_sapiens 0 490
ENST00000508301 IK-010 protein_coding Homo_sapiens 0 1123
ENST00000513256 IK-005 protein_coding Homo_sapiens 0 486
ENST00000523672 IK-013 processed_transcript Homo_sapiens 0 453
ENST00000610522 IK-201 protein_coding Homo_sapiens 0 952
ENST00000613660 IK-202 protein_coding Homo_sapiens 0 2246
ENST00000620556 IK-203 protein_coding Homo_sapiens 0 2255

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