C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000011029 Dnajc19-001 ENSMUSG00000027679 10090 - 3:34056020-34081312 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyLungENSMUST00000011029
Transcript ID Adipose Bladder Breast Kidney Lung
ENSMUST00000011029 2.833±0.00 4.275±0.43 3.393±0.64 7.829±1.78 4.322±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081N CIL_00081N_0002 VISTA 3:33582396-34183856
CIL_00081O CIL_00081O_0002 VISTA 3:33605209-34206178
CIL_0008UV CIL_0008UV_0002 VISTA 3:33803627-34405807
CIL_0001FR CIL_0001FR_0002 CGP 3:33812362-34069342
CIL_0007MF CIL_0007MF_0002 UCNEbase 3:33882710-35464507

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382564 DNAJC19-001 protein_coding Homo_sapiens 0 392
ENST00000428811 DNAJC19P7-001 processed_pseudogene Homo_sapiens 0 263
ENST00000455312 DNAJC19P1-001 processed_pseudogene Homo_sapiens 0 292
ENST00000469657 DNAJC19-004 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000472339 FXR1-006 retained_intron Homo_sapiens 6e-33 147
ENST00000472504 DNAJC19-005 retained_intron Homo_sapiens 1e-25 121
ENST00000473762 CEACAMP3-002 processed_transcript Homo_sapiens 8.40779e-45 185
ENST00000475315 FXR1-002 retained_intron Homo_sapiens 7e-33 147
ENST00000478723 DNAJC19-007 retained_intron Homo_sapiens 0 392
ENST00000479269 DNAJC19-009 protein_coding Homo_sapiens 0 383
ENST00000482363 DNAJC19-002 retained_intron Homo_sapiens 0 202
ENST00000485675 DNAJC19-003 retained_intron Homo_sapiens 1e-24 119
ENST00000486355 DNAJC19-006 protein_coding Homo_sapiens 0 219
ENST00000491873 DNAJC19-008 protein_coding Homo_sapiens 0 309
ENST00000555084 DNAJC19P9-001 processed_pseudogene Homo_sapiens 0 375
ENST00000593340 DNAJC19P2-001 processed_pseudogene Homo_sapiens 0 189

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