C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alcohol dehydrogenase 4 (class II), pi polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000013458 Adh4-001 ENSMUSG00000037797 10090 + 3:138415495-138430892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000013458
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000013458 0.193±0.06 0.089±0.00 0.014±0.00 0.251±0.12 0.025±0.00 0.097±0.03 18.671±18.61 0.036±0.00 0.096±0.03 0.073±0.01 4.205±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C1 CIL_0005C1_000C CGP 3:138374121-138430892

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 IEA retinoid metabolic process
GO:0003960 IDA NADPH:quinone reductase activity
GO:0004022 IDA alcohol dehydrogenase (NAD) activity
GO:0004024 IDA alcohol dehydrogenase activity, zinc-dependent
GO:0004032 IDA alditol:NADP+ 1-oxidoreductase activity
GO:0004745 IEA retinol dehydrogenase activity
GO:0005503 IEA all-trans retinal binding
GO:0005737 IEA cytoplasm
GO:0006066 IEA alcohol metabolic process
GO:0006067 IDA ethanol metabolic process
GO:0006069 IEA ethanol oxidation
GO:0006081 IDA cellular aldehyde metabolic process
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0019115 IEA benzaldehyde dehydrogenase activity
GO:0019841 IEA retinol binding
GO:0035276 IEA ethanol binding
GO:0042572 IEA retinol metabolic process
GO:0046164 IDA alcohol catabolic process
GO:0051287 IEA NAD binding
GO:1901661 IDA quinone metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265512 ADH4-001 protein_coding Homo_sapiens 0 850
ENST00000505590 ADH4-005 protein_coding Homo_sapiens 0 784
ENST00000506705 ADH4-004 nonsense_mediated_decay Homo_sapiens 0 715
ENST00000508393 ADH4-002 protein_coding Homo_sapiens 0 804

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