C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000014640 Ankrd28-201 ENSMUSG00000014496 10090 - 14:31700015-31830415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014640
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014640 3.650±1.32 2.252±0.47 1.239±0.38 5.203±3.50 2.999±0.42 2.852±0.76 3.147±0.64 4.004±0.31 2.104±1.09 2.815±1.38 2.761±0.85 3.821±1.17 3.582±1.92 3.036±1.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A8 CIL_0005A8_0002 CGP 14:31641028-31830415
CIL_0005A7 CIL_0005A7_0002 CGP 14:31700015-32062197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000146436 ankrd28b-001 protein_coding Danio_rerio 0 1461
ENSDART00000027020 ankrd28b-201 protein_coding Danio_rerio 0 1447
ENST00000383777 ANKRD28-201 protein_coding Homo_sapiens 0 4599
ENST00000399451 ANKRD28-003 protein_coding Homo_sapiens 0 4874
ENST00000412318 ANKRD28-001 nonsense_mediated_decay Homo_sapiens 0 4571
ENST00000439830 ANKRD28-002 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000451422 ANKRD28-007 nonsense_mediated_decay Homo_sapiens 0 2985
ENST00000460278 ANKRD28-010 processed_transcript Homo_sapiens 0 747
ENST00000461696 ANKRD28-009 processed_transcript Homo_sapiens 1e-29 135
ENST00000462657 ANKRD28-013 retained_intron Homo_sapiens 0 571
ENST00000463533 ANKRD28-014 retained_intron Homo_sapiens 0 789
ENST00000476472 ANKRD28-011 processed_transcript Homo_sapiens 0 822
ENST00000479043 ANKRD28-015 retained_intron Homo_sapiens 0 265
ENST00000492895 ANKRD28-012 processed_transcript Homo_sapiens 0 486
ENST00000497037 ANKRD28-004 processed_transcript Homo_sapiens 0 4508
ENST00000498524 ANKRD28-006 retained_intron Homo_sapiens 0 2870
ENST00000498713 ANKRD28-008 processed_transcript Homo_sapiens 0 822
ENST00000624145 ANKRD28-202 protein_coding Homo_sapiens 0 4813

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