C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, FYVE domain containing 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000014694 Zfyve20-001 ENSMUSG00000014550 10090 - 6:92186712-92214925 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014694 6.335±1.50 3.731±1.93 5.277±0.10 8.465±1.10 5.517±0.90 4.490±1.71 3.518±0.18 4.472±1.28 3.046±1.27 6.037±2.26 4.019±0.39 7.726±2.32 5.666±1.23 2.468±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AI CIL_0005AI_0002 CGP 6:92169525-92214925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0017137 IPI Rab GTPase binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253699 ZFYVE20-001 protein_coding Homo_sapiens 0 2422
ENST00000426541 ZFYVE20-008 nonsense_mediated_decay Homo_sapiens 0 634
ENST00000441057 ZFYVE20-006 nonsense_mediated_decay Homo_sapiens 0 612
ENST00000449964 ZFYVE20-004 processed_transcript Homo_sapiens 0 857
ENST00000463214 ZFYVE20-007 retained_intron Homo_sapiens 0 627
ENST00000476527 ZFYVE20-002 protein_coding Homo_sapiens 0 2422
ENST00000483098 ZFYVE20-009 processed_transcript Homo_sapiens 9.94922e-44 180

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