C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanosine diphosphate (GDP) dissociation inhibitor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015435 Gdi1-001 ENSMUSG00000015291 10090 + X:74304998-74311862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015435
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015435 38.391±8.98 52.692±8.90 158.441±82.48 33.646±14.80 12.679±2.01 23.069±0.87 35.844±2.03 21.516±6.67 32.278±4.23 8.509±0.82 33.871±10.89 19.708±10.35 2.787±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L4 CIL_0001L4_0002 CGP X:74297097-74311862
CIL_0003LB CIL_0003LB_0002 CGP X:74304998-74320149

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005093 ISS Rab GDP-dissociation inhibitor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0017137 IEA Rab GTPase binding
GO:0030496 IEA midbody
GO:0032482 ISS Rab protein signal transduction
GO:0043005 IEA neuron projection
GO:0043234 IEA protein complex
GO:0043547 IEA positive regulation of GTPase activity
GO:0050771 ISS negative regulation of axonogenesis
GO:0050790 ISS regulation of catalytic activity
GO:0051592 IEA response to calcium ion
GO:0090315 ISS negative regulation of protein targeting to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000008584 gdi2-001 protein_coding Danio_rerio 0 767
ENST00000447750 GDI1-001 protein_coding Homo_sapiens 0 1860
ENST00000460984 GDI1-002 retained_intron Homo_sapiens 0 241
ENST00000465640 GDI1-009 processed_transcript Homo_sapiens 0 466
ENST00000468483 GDI1-004 retained_intron Homo_sapiens 0 710
ENST00000471972 GDI1-014 processed_transcript Homo_sapiens 0 315
ENST00000476540 GDI1-008 retained_intron Homo_sapiens 0 392
ENST00000481304 GDI1-006 retained_intron Homo_sapiens 1e-37 161
ENST00000489589 GDI1-007 retained_intron Homo_sapiens 0 688
ENST00000491154 GDI1-003 retained_intron Homo_sapiens 0 411

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