C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 9, non-muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000016771 Myh9-001 ENSMUSG00000022443 10090 - 15:77760587-77842175 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000016771
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000016771 44.235±0.96 29.435±3.52 48.083±1.54 14.232±10.27 43.725±19.43 60.608±5.72 13.586±0.94 30.037±2.23 15.367±4.58 80.104±1.22 7.439±0.97 56.017±31.66 174.191±108.02 2.711±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GV CIL_0003GV_0002 CGP 15:77747799-77842175
CIL_0006EZ CIL_0006EZ_0003 CGP 15:77760587-77929006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 ISS microfilament motor activity
GO:0000212 IDA meiotic spindle organization
GO:0000904 IMP cell morphogenesis involved in differentiation
GO:0000910 ISS cytokinesis
GO:0001525 ISS angiogenesis
GO:0001701 IMP in utero embryonic development
GO:0001725 ISS stress fiber
GO:0001726 ISS ruffle
GO:0001768 IMP establishment of T cell polarity
GO:0001772 IDA immunological synapse
GO:0001931 IDA uropod
GO:0003779 IEA actin binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005819 IDA spindle
GO:0005826 ISS actomyosin contractile ring
GO:0005829 ISS cytosol
GO:0005886 ISS plasma membrane
GO:0005913 IDA cell-cell adherens junction
GO:0005938 IDA cell cortex
GO:0006200 IEA ATP catabolic process
GO:0006509 ISS membrane protein ectodomain proteolysis
GO:0006928 IMP cellular component movement
GO:0007155 IMP cell adhesion
GO:0007520 IMP myoblast fusion
GO:0008180 IEA COP9 signalosome
GO:0008305 ISS integrin complex
GO:0008360 ISS regulation of cell shape
GO:0015031 ISS protein transport
GO:0015629 ISS actin cytoskeleton
GO:0016020 IEA membrane
GO:0016337 IMP single organismal cell-cell adhesion
GO:0016459 IDA myosin complex
GO:0016460 IDA myosin II complex
GO:0016887 ISS ATPase activity
GO:0030048 ISS actin filament-based movement
GO:0030220 ISS platelet formation
GO:0030224 ISS monocyte differentiation
GO:0030863 IDA cortical cytoskeleton
GO:0030898 IEA actin-dependent ATPase activity
GO:0031032 IEA actomyosin structure organization
GO:0031252 ISS cell leading edge
GO:0031532 ISS actin cytoskeleton reorganization
GO:0031594 IDA neuromuscular junction
GO:0032154 ISS cleavage furrow
GO:0032796 IMP uropod organization
GO:0042641 IEA actomyosin
GO:0042803 ISS protein homodimerization activity
GO:0043234 ISS protein complex
GO:0043495 ISS protein anchor
GO:0043531 IEA ADP binding
GO:0043534 ISS blood vessel endothelial cell migration
GO:0044822 IEA poly(A) RNA binding
GO:0051015 ISS actin filament binding
GO:0051295 IDA establishment of meiotic spindle localization
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation
GO:0097513 IEA myosin II filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000137105 myh9b-001 protein_coding Danio_rerio 0 3500
ENSDART00000092373 myh9b-201 protein_coding Danio_rerio 0 2713
ENSDART00000105232 myh9a-202 protein_coding Danio_rerio 0 2460
ENSDART00000149823 myh9a-001 protein_coding Danio_rerio 0 2447
ENSDART00000150939 myh10-002 protein_coding Danio_rerio 0 2383
ENSDART00000046359 myh10-201 protein_coding Danio_rerio 0 2375
ENSDART00000151114 myh10-001 protein_coding Danio_rerio 0 2375
ENSDART00000011353 myh9a-201 protein_coding Danio_rerio 0 1733
ENSDART00000041142 myh11a-001 protein_coding Danio_rerio 0 1432
ENSDART00000047409 myh14-201 protein_coding Danio_rerio 0 617
ENSDART00000142155 myh14-001 protein_coding Danio_rerio 0 617
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 0 566
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 0 566
ENSDART00000121593 CABZ01112387.1-201 protein_coding Danio_rerio 0 407
ENSDART00000138858 myh11a-002 protein_coding Danio_rerio 0 220
ENST00000216181 MYH9-001 protein_coding Homo_sapiens 0 8063
ENST00000269243 MYH10-001 protein_coding Homo_sapiens 0 2257
ENST00000300036 MYH11-001 protein_coding Homo_sapiens 0 3297
ENST00000360416 MYH10-002 protein_coding Homo_sapiens 0 715
ENST00000376970 MYH14-202 protein_coding Homo_sapiens 0 1465
ENST00000379980 MYH10-201 protein_coding Homo_sapiens 0 2036
ENST00000396324 MYH11-006 protein_coding Homo_sapiens 0 2787
ENST00000401701 MYH9-002 protein_coding Homo_sapiens 0 852
ENST00000413734 MYH16-003 processed_transcript Homo_sapiens 0 226
ENST00000425460 MYH14-203 protein_coding Homo_sapiens 0 1171
ENST00000439784 MYH16-001 unitary_pseudogene Homo_sapiens 0 226
ENST00000440075 MYH14-204 protein_coding Homo_sapiens 0 891
ENST00000452625 MYH11-013 protein_coding Homo_sapiens 0 2782
ENST00000456729 MYH9-015 protein_coding Homo_sapiens 0 468
ENST00000459960 MYH9-009 retained_intron Homo_sapiens 0 481
ENST00000463027 MYH9-003 processed_transcript Homo_sapiens 0 627
ENST00000472210 MYH9-005 processed_transcript Homo_sapiens 0 424
ENST00000473022 MYH9-007 retained_intron Homo_sapiens 0 191
ENST00000475726 MYH9-010 processed_transcript Homo_sapiens 0 736
ENST00000477189 MYH9-006 retained_intron Homo_sapiens 0 523
ENST00000486218 MYH9-011 retained_intron Homo_sapiens 0 737
ENST00000495928 MYH9-008 processed_transcript Homo_sapiens 0 285
ENST00000570785 MYH11-011 retained_intron Homo_sapiens 0 1014
ENST00000571275 MYH11-008 retained_intron Homo_sapiens 0 804
ENST00000571505 MYH11-004 retained_intron Homo_sapiens 0 544
ENST00000576164 MYH11-009 retained_intron Homo_sapiens 1e-18 100
ENST00000576790 MYH11-003 protein_coding Homo_sapiens 0 3291
ENST00000584124 MYH10-010 retained_intron Homo_sapiens 0 272
ENST00000596571 MYH14-008 protein_coding Homo_sapiens 0 1465
ENST00000598205 MYH14-006 protein_coding Homo_sapiens 0 1171
ENST00000599920 MYH14-007 protein_coding Homo_sapiens 0 1171
ENST00000601313 MYH14-001 protein_coding Homo_sapiens 0 839
ENST00000611087 MYH11-201 protein_coding Homo_sapiens 0 3214
ENST00000612165 MYH11-203 protein_coding Homo_sapiens 0 2782
ENST00000614597 MYH11-204 protein_coding Homo_sapiens 0 3214
ENST00000616422 MYH11-205 protein_coding Homo_sapiens 0 3291
ENST00000616439 MYH11-202 protein_coding Homo_sapiens 0 3212
ENST00000618564 MYH11-206 protein_coding Homo_sapiens 0 3212
ENST00000621545 MYH11-207 protein_coding Homo_sapiens 0 2787

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