C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000017354 Med24-002 ENSMUSG00000017210 10090 - 11:98704591-98729435 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000017354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000017354 12.794±3.66 16.456±0.83 7.244±0.08 16.623±10.26 16.358±6.95 14.222±2.22 11.454±1.31 11.366±1.59 9.125±6.00 11.618±2.46 8.947±1.47 18.758±7.37 6.525±2.90 24.258±9.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098Y CIL_00098Y_0002 VISTA 11:98447152-99051430
CIL_0002PX CIL_0002PX_0002 CGP 11:98701263-98729435
CIL_0002KL CIL_0002KL_0002 CGP 11:98704591-98769006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003712 IEA transcription cofactor activity
GO:0003713 IEA transcription coactivator activity
GO:0004402 IEA histone acetyltransferase activity
GO:0004872 IEA receptor activity
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IMP transcription from RNA polymerase II promoter
GO:0006367 IEA transcription initiation from RNA polymerase II promoter
GO:0016573 IEA histone acetylation
GO:0016592 IDA mediator complex
GO:0019827 IMP stem cell maintenance
GO:0030518 IEA intracellular steroid hormone receptor signaling pathway
GO:0030521 IEA androgen receptor signaling pathway
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046966 IEA thyroid hormone receptor binding
GO:0051291 IEA protein heterooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356271 MED24-016 protein_coding Homo_sapiens 0 3323
ENST00000394126 MED24-003 protein_coding Homo_sapiens 0 3659
ENST00000394127 MED24-002 protein_coding Homo_sapiens 0 3323
ENST00000394128 MED24-006 protein_coding Homo_sapiens 0 3659
ENST00000422942 MED24-009 protein_coding Homo_sapiens 0 484
ENST00000428757 MED24-018 protein_coding Homo_sapiens 0 734
ENST00000470126 MED24-008 processed_transcript Homo_sapiens 0 215
ENST00000479829 MED24-005 processed_transcript Homo_sapiens 0 721
ENST00000491466 MED24-010 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000492176 MED24-011 retained_intron Homo_sapiens 0 693
ENST00000501516 MED24-004 protein_coding Homo_sapiens 0 2931
ENST00000535071 MED24-014 protein_coding Homo_sapiens 0 2887
ENST00000535508 MED24-017 nonsense_mediated_decay Homo_sapiens 0 3225
ENST00000537674 MED24-024 protein_coding Homo_sapiens 0 540
ENST00000543759 MED24-025 protein_coding Homo_sapiens 0 291
ENST00000577488 MED24-030 retained_intron Homo_sapiens 0 399
ENST00000578161 MED24-026 protein_coding Homo_sapiens 0 479
ENST00000578901 MED24-019 nonsense_mediated_decay Homo_sapiens 0 632
ENST00000579364 MED24-036 retained_intron Homo_sapiens 0 320
ENST00000580302 MED24-023 protein_coding Homo_sapiens 0 222
ENST00000580517 MED24-027 protein_coding Homo_sapiens 0 291
ENST00000580720 MED24-035 retained_intron Homo_sapiens 0 627
ENST00000580885 MED24-013 protein_coding Homo_sapiens 0 1166
ENST00000580921 MED24-034 retained_intron Homo_sapiens 0 673
ENST00000581054 MED24-028 retained_intron Homo_sapiens 0 340
ENST00000581058 MED24-033 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000582023 MED24-022 protein_coding Homo_sapiens 0 525
ENST00000584077 MED24-031 retained_intron Homo_sapiens 0 272
ENST00000585249 MED24-029 retained_intron Homo_sapiens 0 263
ENST00000585306 MED24-021 protein_coding Homo_sapiens 0 606
ENST00000614384 MED24-201 protein_coding Homo_sapiens 0 375

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