C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcriptional adaptor 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018795 Tada2a-001 ENSMUSG00000018651 10090 - 11:84078920-84129600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018795
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018795 4.689±2.40 2.413±0.49 6.920±1.03 12.566±3.83 2.627±1.05 3.602±0.81 2.650±0.47 3.529±0.21 4.635±3.00 3.752±1.68 5.917±0.85 6.137±2.09 6.382±2.11 2.321±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GS CIL_0008GS_0002 VISTA 11:84076005-84677109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001932 IMP regulation of protein phosphorylation
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005634 IDA nucleus
GO:0005671 IDA Ada2/Gcn5/Ada3 transcription activator complex
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007067 IMP mitotic nuclear division
GO:0031063 IGI regulation of histone deacetylation
GO:0031647 IMP regulation of protein stability
GO:0072686 IDA mitotic spindle
GO:0090043 IGI regulation of tubulin deacetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000610834 TADA2A-007 retained_intron Homo_sapiens 0 377
ENST00000612272 TADA2A-002 protein_coding Homo_sapiens 0 1777
ENST00000614112 TADA2A-010 protein_coding Homo_sapiens 0 281
ENST00000614122 TADA2A-009 nonsense_mediated_decay Homo_sapiens 0 640
ENST00000615182 TADA2A-001 protein_coding Homo_sapiens 0 1777
ENST00000615328 TADA2A-006 protein_coding Homo_sapiens 0 830
ENST00000616284 TADA2A-015 retained_intron Homo_sapiens 0 460
ENST00000617828 TADA2A-201 protein_coding Homo_sapiens 0 1772
ENST00000619335 TADA2A-014 processed_transcript Homo_sapiens 0 946
ENST00000619777 TADA2A-012 nonsense_mediated_decay Homo_sapiens 0 898
ENST00000620086 TADA2A-011 processed_transcript Homo_sapiens 0 1057
ENST00000620367 TADA2A-003 protein_coding Homo_sapiens 0 1105
ENST00000620628 TADA2A-004 nonsense_mediated_decay Homo_sapiens 0 1777
ENST00000620838 TADA2A-013 retained_intron Homo_sapiens 5e-38 161
ENST00000621780 TADA2A-008 protein_coding Homo_sapiens 0 327
ENST00000622522 TADA2A-202 protein_coding Homo_sapiens 0 1772

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