C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane BAX inhibitor motif containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020446 Tmbim4-001 ENSMUSG00000020225 10090 + 10:120208750-120224917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020446
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020446 53.741±6.53 40.897±10.97 52.005±3.09 17.984±4.41 57.784±11.97 72.253±22.63 55.162±5.54 278.008±23.59 55.620±23.72 53.254±1.97 38.994±4.71 52.127±12.86 51.683±19.09 103.305±43.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WI CIL_0006WI_0002 CGP 10:120083608-120202130

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005795 ISS Golgi stack
GO:0006915 IEA apoptotic process
GO:0016021 IEA integral component of membrane
GO:0043066 ISS negative regulation of apoptotic process
GO:0050848 ISS regulation of calcium-mediated signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000286424 TMBIM4-006 protein_coding Homo_sapiens 0 531
ENST00000358230 TMBIM4-001 protein_coding Homo_sapiens 0 617
ENST00000398033 TMBIM4-004 protein_coding Homo_sapiens 0 217
ENST00000538217 TMBIM4-012 retained_intron Homo_sapiens 0 265
ENST00000539652 RP11-745O10.4-001 nonsense_mediated_decay Homo_sapiens 5.60519e-45 185
ENST00000542724 TMBIM4-002 protein_coding Homo_sapiens 0 499
ENST00000544599 TMBIM4-007 protein_coding Homo_sapiens 0 532
ENST00000545407 TMBIM4-005 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000613669 TMBIM4-202 protein_coding Homo_sapiens 0 597

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