C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020507 Fgf18-001 ENSMUSG00000057967 10090 - 11:33117430-33147400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020507
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020507 1.437±0.14 0.719±0.20 0.307±0.06 0.817±0.23 1.259±0.26 0.481±0.25 1.366±0.58 0.301±0.11 0.095±0.06 3.702±0.99 0.432±0.08 1.767±0.52 0.629±0.62 0.590±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00092S CIL_00092S_0002 VISTA 11:32891798-33493112
CIL_00097F CIL_00097F_0002 VISTA 11:32999598-33601607
CIL_00088M CIL_00088M_0002 VISTA 11:33042866-33643782
CIL_000977 CIL_000977_0002 VISTA 11:33092412-33693558
CIL_00098H CIL_00098H_0002 VISTA 11:33099828-33701076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IMP ossification
GO:0001525 IMP angiogenesis
GO:0001957 IMP intramembranous ossification
GO:0001958 IMP endochondral ossification
GO:0002063 IMP chondrocyte development
GO:0005104 TAS fibroblast growth factor receptor binding
GO:0005105 IEA type 1 fibroblast growth factor receptor binding
GO:0005111 IEA type 2 fibroblast growth factor receptor binding
GO:0005576 IEA extracellular region
GO:0005730 IEA nucleolus
GO:0007165 TAS signal transduction
GO:0007399 IEA nervous system development
GO:0008083 IEA growth factor activity
GO:0008284 IMP positive regulation of cell proliferation
GO:0008543 IGI fibroblast growth factor receptor signaling pathway
GO:0030324 IMP lung development
GO:0030949 IMP positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0032332 IGI positive regulation of chondrocyte differentiation
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274625 FGF18-001 protein_coding Homo_sapiens 0 1301

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