C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: granzyme M (lymphocyte met-ase 1)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020549 Gzmm-001 ENSMUSG00000054206 10090 + 10:79689020-79695261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020549
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020549 0.359±0.12 0.288±0.11 0.600±0.08 0.477±0.21 0.555±0.20 0.238±0.06 1.548±0.24 0.332±0.14 0.145±0.08 0.611±0.30 3.600±0.52 0.300±0.12 1.108±0.84 0.267±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0001FW CIL_0001FW_0002 CGP 10:79682195-79695261
CIL_00008J CIL_00008J_0002 CGP 10:79689020-79711969

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004175 IDA endopeptidase activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0006508 IEA proteolysis
GO:0016020 IEA membrane
GO:0019835 IDA cytolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264553 GZMM-001 protein_coding Homo_sapiens 0 265
ENST00000592501 GZMM-002 protein_coding Homo_sapiens 0 265

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