C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: follistatin-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020575 Fstl3-001 ENSMUSG00000020325 10090 + 10:79777272-79782630 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020575 7.678±0.73 16.845±5.63 6.428±0.86 0.123±0.01 3.296±0.98 8.708±1.02 1.360±0.47 2.537±0.88 0.188±0.27 13.374±3.37 0.148±0.05 8.613±2.75 32.493±28.72 2.379±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0004VK CIL_0004VK_0002 CGP 10:79758515-79782630
CIL_00008F CIL_00008F_0002 CGP 10:79777272-79790961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001822 IEA kidney development
GO:0001968 IEA fibronectin binding
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0005615 IDA extracellular space
GO:0005634 IEA nucleus
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007283 IEA spermatogenesis
GO:0008584 IEA male gonad development
GO:0022409 IEA positive regulation of cell-cell adhesion
GO:0030141 IEA secretory granule
GO:0030324 IEA lung development
GO:0030325 IEA adrenal gland development
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0032926 IEA negative regulation of activin receptor signaling pathway
GO:0044306 IEA neuron projection terminus
GO:0045671 IEA negative regulation of osteoclast differentiation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0048185 IDA activin binding
GO:0071248 IEA cellular response to metal ion
GO:0090101 IEA negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000166139 FSTL3-001 protein_coding Homo_sapiens 0 676
ENST00000589185 FSTL3-005 protein_coding Homo_sapiens 0 315
ENST00000591552 FSTL3-003 protein_coding Homo_sapiens 0 503
ENST00000592058 FSTL3-006 processed_transcript Homo_sapiens 0 459

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