C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) mitochondrial (DNA directed)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020580 Polrmt-001 ENSMUSG00000020329 10090 - 10:79736130-79746579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020580
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020580 11.494±0.97 17.857±3.77 7.263±0.45 8.213±4.81 14.838±2.88 16.066±1.75 9.289±0.95 14.220±2.70 7.152±1.40 10.434±0.75 6.675±0.70 14.685±7.25 5.358±2.96 6.348±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0005ZK CIL_0005ZK_0003 CGP 10:79716634-79746581
CIL_0005ZL CIL_0005ZL_0003 CGP 10:79736123-79756961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0006351 IEA transcription, DNA-templated
GO:0042645 IEA mitochondrial nucleoid
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000588649 POLRMT-001 protein_coding Homo_sapiens 0 1622
ENST00000593183 AC005336.5-001 processed_pseudogene Homo_sapiens 0 621

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