C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAR1 gene homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020653 Sar1b-001 ENSMUSG00000020386 10090 + 11:51763687-51791925 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000020653
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000020653 18.582±2.59 10.354±1.67 54.402±3.17 40.162±10.19 25.476±16.83 13.308±1.60 39.848±2.04 34.821±2.51 60.654±16.20 17.675±2.81 293.683±25.99 12.741±9.60 39.004±6.75 8.872±1.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0006886 IEA intracellular protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000402673 SAR1B-001 protein_coding Homo_sapiens 0 1118
ENST00000439578 SAR1B-002 protein_coding Homo_sapiens 0 821
ENST00000502286 SAR1B-006 protein_coding Homo_sapiens 0 425
ENST00000502539 SAR1B-009 protein_coding Homo_sapiens 0 619
ENST00000503318 SAR1B-008 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000505758 SAR1B-011 protein_coding Homo_sapiens 0 713
ENST00000507419 SAR1B-004 protein_coding Homo_sapiens 0 861
ENST00000508363 SAR1B-003 retained_intron Homo_sapiens 0 861
ENST00000509730 SAR1B-007 protein_coding Homo_sapiens 0 507
ENST00000509937 SAR1B-010 protein_coding Homo_sapiens 0 562

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