Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	smoothelin
ENSMUST00000020721	Smtn-001	ENSMUSG00000020439	10090	-	11:3517523-3539292	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000020721	4.829±0.81	2.493±0.95	2.638±0.17	3.090±0.75	8.892±2.45	1.406±0.92	5.093±1.38	4.830±0.41	6.709±1.11	43.564±19.45	0.965±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000NL	CIL_0000NL_0002	CGP	11:3514684-3540612

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005737	IEA	cytoplasm
GO:0005856	IEA	cytoskeleton

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSDART00000082614	smtnb-201	protein_coding	Danio_rerio	0	350
ENSDART00000144570	smtnb-001	protein_coding	Danio_rerio	1e-16	94
ENST00000333137	SMTN-002	protein_coding	Homo_sapiens	0	2800
ENST00000347557	SMTN-001	protein_coding	Homo_sapiens	0	2239
ENST00000358743	SMTN-003	protein_coding	Homo_sapiens	0	2359
ENST00000399154	SMTNL1-201	protein_coding	Homo_sapiens	6.00036e-42	176
ENST00000404574	SMTN-009	protein_coding	Homo_sapiens	0	1116
ENST00000460658	SMTN-006	retained_intron	Homo_sapiens	0	1144
ENST00000466272	SMTN-020	retained_intron	Homo_sapiens	0	239
ENST00000472911	SMTN-022	retained_intron	Homo_sapiens	0	278
ENST00000489337	SMTN-004	retained_intron	Homo_sapiens	0	1467
ENST00000493335	SMTN-007	retained_intron	Homo_sapiens	0	1116
ENST00000504335	SMTN-024	retained_intron	Homo_sapiens	0	279
ENST00000527972	SMTNL1-001	protein_coding	Homo_sapiens	6.00036e-42	176
ENST00000612341	SMTN-201	protein_coding	Homo_sapiens	0	2721
ENST00000619644	SMTN-202	protein_coding	Homo_sapiens	0	1291
ENST00000624247	SMTN-026	protein_coding	Homo_sapiens	0	1369

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