C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5',3'-nucleotidase, cytosolic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021082 Nt5c-001 ENSMUSG00000020736 10090 - 11:115490420-115491862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021082 26.271±1.73 33.712±6.06 29.437±1.47 22.640±5.22 19.868±7.52 54.055±3.46 3.806±0.67 20.086±0.59 18.137±6.12 22.379±0.78 3.783±1.14 34.511±8.41 13.084±4.04 12.280±3.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_00008L CIL_00008L_0002 CGP 11:115462474-115490467
CIL_0001FZ CIL_0001FZ_0002 CGP 11:115475667-115491862
CIL_0001JI CIL_0001JI_0002 CGP 11:115490420-115514387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0008252 IEA nucleotidase activity
GO:0008253 IDA 5'-nucleotidase activity
GO:0009223 IEA pyrimidine deoxyribonucleotide catabolic process
GO:0009264 IDA deoxyribonucleotide catabolic process
GO:0016311 IEA dephosphorylation
GO:0016791 IDA phosphatase activity
GO:0019103 IEA pyrimidine nucleotide binding
GO:0046872 IEA metal ion binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245552 NT5C-001 protein_coding Homo_sapiens 0 665
ENST00000577523 NT5C-012 retained_intron Homo_sapiens 0 396
ENST00000578095 NT5C-016 retained_intron Homo_sapiens 0 322
ENST00000578337 NT5C-009 protein_coding Homo_sapiens 1e-24 117
ENST00000578407 NT5C-014 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000579023 NT5C-006 retained_intron Homo_sapiens 0 285
ENST00000579082 NT5C-007 processed_transcript Homo_sapiens 0 351
ENST00000580423 NT5C-010 protein_coding Homo_sapiens 0 191
ENST00000580758 NT5C-003 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000582160 NT5C-013 protein_coding Homo_sapiens 0 488
ENST00000582170 NT5C-015 protein_coding Homo_sapiens 0 643
ENST00000582744 NT5C-008 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000583655 NT5C-002 retained_intron Homo_sapiens 0 324
ENST00000584352 NT5C-011 retained_intron Homo_sapiens 0 318

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