C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110008L16 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021411 1110008L16Rik-001 ENSMUSG00000021023 10090 + 12:55302637-55382496 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021411
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021411 1.722±0.11 0.965±0.23 1.933±0.34 1.751±0.72 1.363±0.58 0.690±0.10 1.209±0.22 2.342±0.43 2.064±0.62 0.892±0.26 1.763±0.34 1.684±0.53 1.678±0.20 2.306±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00045K CIL_00045K_0002 CGP 12:55199533-55303000
CIL_00028P CIL_00028P_0002 CGP 12:55280814-55382533
CIL_00045I CIL_00045I_0002 CGP 12:55299577-55418454

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0008033 IEA tRNA processing
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000250377 KIAA0391-002 protein_coding Homo_sapiens 0 721
ENST00000321130 KIAA0391-201 protein_coding Homo_sapiens 0 717
ENST00000534898 KIAA0391-001 protein_coding Homo_sapiens 0 1375
ENST00000557404 KIAA0391-008 protein_coding Homo_sapiens 0 645
ENST00000557565 KIAA0391-001 nonsense_mediated_decay Homo_sapiens 0 1375
ENST00000603544 KIAA0391-003 protein_coding Homo_sapiens 0 721
ENST00000604948 KIAA0391-005 protein_coding Homo_sapiens 0 1352
ENST00000605870 KIAA0391-004 protein_coding Homo_sapiens 0 765

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