C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thioredoxin-related transmembrane protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021471 Tmx1-001 ENSMUSG00000021072 10090 + 12:70453095-70468040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021471
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021471 5.556±1.37 8.527±0.60 12.974±1.13 14.165±6.56 5.592±1.37 7.427±0.57 11.472±0.87 8.513±1.55 17.684±11.03 8.200±0.76 4.178±0.60 11.975±5.23 20.719±8.63 8.783±2.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00069N CIL_00069N_0003 CGP 12:70244539-70468040
CIL_00069M CIL_00069M_0003 CGP 12:70453095-70902232

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003756 IBA protein disulfide isomerase activity
GO:0005730 IEA nucleolus
GO:0005783 IBA endoplasmic reticulum
GO:0005789 IEA endoplasmic reticulum membrane
GO:0006457 IBA protein folding
GO:0015036 IEA disulfide oxidoreductase activity
GO:0016021 IEA integral component of membrane
GO:0034976 IBA response to endoplasmic reticulum stress
GO:0045454 IEA cell redox homeostasis
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000438427 AC011290.5-001 processed_pseudogene Homo_sapiens 0 547
ENST00000457354 TMX1-001 protein_coding Homo_sapiens 0 878
ENST00000555574 TMX1-002 retained_intron Homo_sapiens 0 307
ENST00000556683 TMX1-003 nonsense_mediated_decay Homo_sapiens 0 553
ENST00000603094 RP11-159H10.4-001 processed_pseudogene Homo_sapiens 0 446

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