C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: amnionless
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000021707 Amn-201 ENSMUSG00000021278 10090 + 12:111271111-111276426 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021707
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021707 0.080±0.04 0.093±0.04 0.337±0.18 1.489±0.52 0.862±0.47 4.545±2.23 0.028±0.00 103.444±19.66 0.389±0.32 0.138±0.09 0.039±0.01 0.413±0.24 42.430±51.86 1.852±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_00040T CIL_00040T_0002 CGP 12:111166370-111276426
CIL_0001GW CIL_0001GW_0002 CGP 12:111271111-111377718

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IEA receptor binding
GO:0005615 IEA extracellular space
GO:0006898 IEA receptor-mediated endocytosis
GO:0007275 IEA multicellular organismal development
GO:0007588 IMP excretion
GO:0008104 IMP protein localization
GO:0015889 IEA cobalamin transport
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0030139 IEA endocytic vesicle
GO:0043001 IEA Golgi to plasma membrane protein transport
GO:0045177 IDA apical part of cell
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299155 AMN-001 protein_coding Homo_sapiens 0 717

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