C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small EDRK-rich factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022145 Serf1-001 ENSMUSG00000021643 10090 + 13:100108012-100114238 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022145
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022145 5.630±0.71 20.429±3.98 14.008±0.45 75.803±11.39 3.792±1.29 9.627±1.97 1.955±0.75 6.906±0.90 6.737±2.34 3.402±0.91 2.661±1.04 10.546±4.74 7.147±4.25 519.287±95.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZD CIL_0004ZD_0003 CGP 13:100107997-100137690

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317633 SERF1A-001 protein_coding Homo_sapiens 0 425
ENST00000354833 SERF1A-002 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000380750 SERF1B-001 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000380751 SERF1B-004 protein_coding Homo_sapiens 0 425
ENST00000503509 SERF1A-004 retained_intron Homo_sapiens 0 390
ENST00000503931 SERF1B-008 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000504458 SERF1A-003 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000506542 SERF1B-002 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000507177 SERF1B-005 processed_transcript Homo_sapiens 2e-35 152
ENST00000507348 SERF1A-007 protein_coding Homo_sapiens 0 390
ENST00000512649 SERF1A-006 protein_coding Homo_sapiens 5e-35 152
ENST00000512868 SERF1A-005 protein_coding Homo_sapiens 3e-35 152
ENST00000513144 SERF1B-009 retained_intron Homo_sapiens 0 390
ENST00000513436 SERF1A-008 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000514285 SERF1B-006 processed_transcript Homo_sapiens 0 333
ENST00000515588 SERF1B-007 protein_coding Homo_sapiens 5e-35 152
ENST00000611277 SERF1B-009 protein_coding Homo_sapiens 0 390
ENST00000611616 SERF1B-004 protein_coding Homo_sapiens 0 431
ENST00000611952 SERF1B-008 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000613172 SERF1B-201 protein_coding Homo_sapiens 0 196
ENST00000613176 SERF1B-007 protein_coding Homo_sapiens 5e-35 152
ENST00000614310 SERF1A-201 protein_coding Homo_sapiens 0 403
ENST00000614330 SERF1B-002 protein_coding Homo_sapiens 4.06377e-44 183
ENST00000614527 SERF1A-202 protein_coding Homo_sapiens 1e-38 165
ENST00000621240 SERF1B-005 protein_coding Homo_sapiens 2e-35 152
ENST00000621283 SERF1B-202 protein_coding Homo_sapiens 0 435
ENST00000622047 SERF1B-006 protein_coding Homo_sapiens 0 333
ENST00000622553 SERF1B-001 protein_coding Homo_sapiens 4.06377e-44 183

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