C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5803
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022493 Gm5803-001 ENSMUSG00000021927 10090 - 15:22713868-22714830 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverMuscleOvaryPlacentaENSMUST00000022493
Transcript ID Adipose Bladder Brain Colon Liver Muscle Ovary Placenta
ENSMUST00000022493 0.109±0.06 0.083±0.00 0.576±0.43 0.146±0.00 0.238±0.32 0.046±0.01 0.222±0.00 0.133±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XA CIL_0003XA_0003 CGP 15:21111452-23474418

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 887
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 1013
ENST00000342073 HNRNPA1P61-001 processed_pseudogene Homo_sapiens 0 976
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 1258
ENST00000391992 HNRNPA1P34-001 processed_pseudogene Homo_sapiens 0 1011
ENST00000394002 HNRNPA1P6-001 unprocessed_pseudogene Homo_sapiens 0 1029
ENST00000396326 HNRNPA1P32-001 processed_pseudogene Homo_sapiens 0 804
ENST00000397777 HNRNPA1P41-001 processed_pseudogene Homo_sapiens 0 549
ENST00000401954 HNRNPA1P1-001 processed_pseudogene Homo_sapiens 0 944
ENST00000404243 HNRNPA1P37-001 processed_pseudogene Homo_sapiens 0 1005
ENST00000405292 HNRNPA1P19-001 processed_pseudogene Homo_sapiens 0 403
ENST00000411674 HNRNPA1P64-001 processed_pseudogene Homo_sapiens 0 715
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 758
ENST00000412087 HNRNPA1P27-001 processed_pseudogene Homo_sapiens 0 1116
ENST00000414732 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1110
ENST00000416539 HNRNPA1P66-001 processed_pseudogene Homo_sapiens 0 830
ENST00000420836 HNRNPA1P70-001 processed_pseudogene Homo_sapiens 0 678
ENST00000421426 HNRNPA1P33-001 processed_pseudogene Homo_sapiens 0 686
ENST00000422644 HNRNPA1P25-001 processed_pseudogene Homo_sapiens 0 861
ENST00000424115 HNRNPA1P21-001 processed_pseudogene Homo_sapiens 0 1120
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 1096
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 989
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 1086
ENST00000429216 HNRNPA1P35-001 processed_pseudogene Homo_sapiens 0 1225
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 684
ENST00000431344 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1116
ENST00000431359 HNRNPA1P57-002 processed_transcript Homo_sapiens 0 239
ENST00000432375 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1127
ENST00000433537 HNRNPA1P18-001 processed_pseudogene Homo_sapiens 0 551
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 1186
ENST00000436809 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1122
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 0 1059
ENST00000440214 AC108039.3-001 processed_pseudogene Homo_sapiens 0 366
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 905
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 0 1064
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 0 946
ENST00000441603 HNRNPA1P53-001 processed_pseudogene Homo_sapiens 0 1009
ENST00000444886 HNRNPA1P15-001 processed_pseudogene Homo_sapiens 0 1050
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 1279
ENST00000446472 HNRNPA1P73-001 processed_pseudogene Homo_sapiens 0 819
ENST00000446988 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1138
ENST00000446999 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1138
ENST00000448627 HNRNPA1P31-001 processed_pseudogene Homo_sapiens 0 544
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 0 1133
ENST00000450624 HNRNPA1P9-001 processed_pseudogene Homo_sapiens 0 939
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 1066
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 730
ENST00000452727 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1127
ENST00000457180 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 1138
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 765
ENST00000474219 HNRNPA3P8-001 processed_pseudogene Homo_sapiens 0 745
ENST00000476029 HNRNPA1P24-001 processed_pseudogene Homo_sapiens 0 582
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 0 1044
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 691
ENST00000503999 HNRNPA1P44-001 processed_pseudogene Homo_sapiens 0 824
ENST00000505767 HNRNPA1P56-001 processed_pseudogene Homo_sapiens 0 1094
ENST00000505935 HNRNPA1P55-001 processed_pseudogene Homo_sapiens 0 1068
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 872
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 1003
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 0 1061
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 1212
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 1269
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 1072
ENST00000526810 HNRNPA1P60-001 processed_pseudogene Homo_sapiens 0 998
ENST00000529475 HNRNPA1P76-001 processed_pseudogene Homo_sapiens 0 196
ENST00000529511 HNRNPA1P72-001 processed_pseudogene Homo_sapiens 0 645
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 1297
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 0 950
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 808
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 1297
ENST00000547708 HNRNPA1-015 protein_coding Homo_sapiens 0 431
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 588
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 815
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 0 787
ENST00000550994 HNRNPA1-014 protein_coding Homo_sapiens 0 593
ENST00000551679 HNRNPA1-020 retained_intron Homo_sapiens 0 289
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 401
ENST00000558213 HNRNPA1P5-001 processed_pseudogene Homo_sapiens 0 1077
ENST00000559372 HNRNPA1P62-001 processed_pseudogene Homo_sapiens 0 970
ENST00000560782 HNRNPA1P74-001 processed_pseudogene Homo_sapiens 0 719
ENST00000560893 HNRNPA1P45-001 processed_pseudogene Homo_sapiens 0 255
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 1286
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 1282
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 1101
ENST00000580106 HNRNPA1P11-001 processed_pseudogene Homo_sapiens 0 979
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 0 1053
ENST00000604027 HNRNPA1P67-001 processed_pseudogene Homo_sapiens 0 917

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