C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: progesterone immunomodulatory binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000022650 Pibf1-201 ENSMUSG00000022064 10090 + 14:99099433-99254493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022650
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022650 0.795±0.24 3.592±1.35 3.674±0.85 4.628±1.26 1.509±1.40 1.922±1.19 0.945±0.20 0.701±0.25 1.682±1.03 1.262±1.30 1.639±0.19 6.949±1.97 4.882±2.50 7.608±7.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095B CIL_00095B_0002 VISTA 14:98519484-99120234
CIL_000955 CIL_000955_0002 VISTA 14:98530064-99131289
CIL_0009CH CIL_0009CH_0002 VISTA 14:98532300-99134612
CIL_0009CG CIL_0009CG_0002 VISTA 14:98538461-99140576
CIL_000956 CIL_000956_0002 VISTA 14:98594511-99195418
CIL_0009CJ CIL_0009CJ_0002 VISTA 14:98658352-99259867
CIL_0005KC CIL_0005KC_0003 CGP 14:99046427-99099770
CIL_0002NH CIL_0002NH_0002 CGP 14:99076634-99254493
CIL_00015J CIL_00015J_0002 CGP 14:99099433-99313405

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005813 IEA centrosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326291 PIBF1-001 protein_coding Homo_sapiens 0 2512
ENST00000377767 DIS3-001 protein_coding Homo_sapiens 0 265
ENST00000377780 DIS3-002 protein_coding Homo_sapiens 0 265
ENST00000475871 DIS3-004 processed_transcript Homo_sapiens 0 265
ENST00000489797 PIBF1-002 processed_transcript Homo_sapiens 0 453
ENST00000490646 DIS3-003 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000492803 PIBF1-003 processed_transcript Homo_sapiens 0 385
ENST00000545453 DIS3-201 protein_coding Homo_sapiens 0 265
ENST00000615625 PIBF1-201 protein_coding Homo_sapiens 0 852
ENST00000617689 PIBF1-007 protein_coding Homo_sapiens 0 2313

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